LOCUS CO960975 692 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15e02.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO960975 VERSION CO960975.1 GI:51334159 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 692) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..692 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gcggacgcgt ttctgctgtt ttactcaaac ggcgcattga acaagatggc gacttgactt 61 ggcatgaagc accttattgc tgcgaagagg gccatgagcc tgcacactgg ctggccgtgg 121 aggaggcggc actccgattc gagcatgaca atcgagccga gatccaggcg cggatgattg 181 gacggctagc cgagtgcgga aaggcggcca atttccgcac attcaaaaag attgtggatg 241 tgtactttga attgctgcaa caccgcttgg accaaggagg agagagtccg caaattccca 301 gcattctgtg cgtgcccatt ctggctctgg tcgcgttcac ggggttgtat gcgcgaaaat 361 tggccgaagc ggatgcagaa ctgggagatc gtaacagaga ctttcgcaga gaactctacc 421 aagtgtccat ctatgggtcg gccgtgctca gcgaaaaact gcgcctattt caatactcat 481 gggaccattt ctgcggagag acgcgcattc tgctagaacg aatcgcttca cagtatcccc 541 aatccgcctc ctcccgtctg ttcattggtg tcccaatcgc aatttgtggc cttgctgccg 601 ctgcctattt cttcatccgt cgcacagcga ttacaacttg agagcgggaa ttcactgata 661 cctacctata atataatatg taaatcccat gc //