LOCUS CO960964 730 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15c12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO960964 VERSION CO960964.1 GI:51334148 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 730) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 772 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..730 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cttcgaaagc tgattttgaa atggtttgcg atcaaataat cactgagcag atggactcaa 61 tgttttcgga agttcgacag aagtgtgctt ccttgcttgc tcaaaccatc gaaaagaagc 121 gcgccagcct cggatcgcaa caatcggcgg agacaagtga acttcagcaa ggaacggtgc 181 agacaatcga tggaagcgtt gaccaggtca ttgaattatg cgagaaactt tctgaattgc 241 ttgcaatttt ggagaatggc gtggattcac ggatgaaagt gaacaataga cttaacgact 301 tagtctcacg cttcgcgaac gccaacgaga agcataatga aatttacaac aagtccgcca 361 aatttactct ggatgccatt ctcgacaaga ttgtcaagaa tttggatggt tttgcacgcg 421 caaacaaaga gatcgattca atcaaacagc tcaaaataga ggcggagagg cgcatgaaca 481 cttcgaaggt caatgtcgag caaactgcga agagcattga agcgatggat caggaattcg 541 gtcgactttg cgctcactat gaccaacttt gaaacaaaaa tattgttctc cattaccatt 601 ggctattgtt taagattaat cagcgatcat ggtatttcgg tcatctcgta ccgattattg 661 taatcgtcaa taatctatca agtttactgc ggataaaaat atgatttaaa aaaaaaaaaa 721 aaaaaaaaaa //