LOCUS CO960962 625 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15c09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O48829 O48829 PUTATIVE GLYCINE-RICH, ZINC-FINGER DNA-BINDING PROTEIN, mRNA sequence. ACCESSION CO960962 VERSION CO960962.1 GI:51334146 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 625) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..625 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gtgagtcgag agttgaggag gcgacgttga gttgagaaga gagacgagaa gaagcgagtt 61 gagaagatga gctctgggat cgaatgctac cgatgccatg agatgggcca catctcccgc 121 gagtgtccca actctggtgg tcaaggaggt gggcgtggtg gtggaggacc acggggaggc 181 ggtggagatg tgaaatgcta caattgtaac ggctatggac atttcgctcg cgattgtcgt 241 gatggtggtg gagaccgccg tggcgggggc ggtggtggtg gacgaggcga tgaccgcggc 301 actaagtgct acaactgcgg agggtatggt cactttgcgc gcgaatgccg tgatgggggt 361 ggagaccgcc gtggaggagg cggacgtgac aaccgtggcg atgatcgccg aggaggcggt 421 ggaggtggcg gccgtgacgg tggcttcaac tgcggcgaga gcggacactt ctctcgtgaa 481 tgtcctaagg gtggaggagg aggacgcggt ggcggtggcg gagatcgacc atgctacaac 541 tgcaacgagt ccggacatct gagccgtgac tgcacgaagg actcgcgcta gagcgcgtgc 601 cacaaatggc accggtgtgg aaagc //