LOCUS CO960960 703 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15c07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains element MSR1 repetitive element, mRNA sequence. ACCESSION CO960960 VERSION CO960960.1 GI:51334144 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 703) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..703 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gtcgtttccc ccgccgcacc agccctactc caacaggatg gacggcaacc caacctacgc 61 catgtccatg cctgcccacg tctatcccga gacgcactcc cccgtccacg gcaaaccgaa 121 gcgaacattc ggtgagaagg tgaagatggc cctctacttg gtcgctgtgg cactgctggt 181 gcttctgctg ctggccatcg tgttctccgc cgtcatgatg ctgttcgacg agaatcgcgc 241 ctttggacgc gcactccgcg gctggaaggt ctggagaagt ggcggcaacg ggaacgacag 301 gaacgcgatg cagacgaacg aatgatgaac aggaggactg taaatgggaa agggaccacc 361 aattcactgt gtgttcaacc ctccaacctc caactccaat gcctcccgca cgtccataat 421 gtccactctc cactgtcatt gtgctcattc tactatgatt tcctttgact ttttttgcca 481 tttatacttt aattttattg cctattagta gcagaaataa aaatgataaa taattaaaaa 541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 601 aaaaaaaaaa aaaaaaaaag aaaaaaaaaa aaccaattcc ccaaattttt ttctccctgg 661 ggggaaattt cgaaaaattc ccaccccagg ggcgcccccc caa //