LOCUS CO960956 781 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15b05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9XTD8 Q9XTD8 6R55.1 PROTEIN. [1], mRNA sequence. ACCESSION CO960956 VERSION CO960956.1 GI:51334140 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 781) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..781 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gctgttcaaa cagcaaactt gttattcaca ctcatttatc tttggtcatt ctacacagat 61 tatgaattga caaagattta tcggatcctg ccagtgcccg gtctttacta cagcaagttg 121 gtgtggctaa caatcgtcaa tctctgtctg caacaactct accatgcagt tggtgccatt 181 ttggccatgt ttgacgttag aaaaacatcc attcttcatc cgtttcactt tgtcgcgact 241 accctggcat ttccagtttc gatgacagtc gtgttgctgt tctggggact cgtctaccta 301 gatccgaact tccttgtcaa ggaggagaat gcattccttt tcgaacacaa gttcttcaac 361 cacagcattc acactttccc actcttagcc atgcttgttg acttctccat ttggaaccac 421 tctcgtcctt ctcggcgcgg ggctttcatt gccgtggcga tattcaccgc tgcttacctg 481 attgacattc actatttcta ctacacacac ggcttctggg catacccaat tcttggacaa 541 ctcgcgccct ggtctcgtgt tttgttcttc gtgttctgct cgattttcat tttctgcact 601 tttatcgccg gcgacctcgt caatggatgg atccacgcca tgtggcgtca caaaaagagg 661 gaggggcgaa aggggaaaag aaatgctaaa aaagttgcct aggaatagta aagaaacgca 721 cattccgaac aattgttaaa tcaaatccca tggacaaatt caacaatggt cggttcgttt 781 c //