LOCUS CO960955 641 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15b04.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q94569 Q94569 SEC-2 PROTEIN, mRNA sequence. ACCESSION CO960955 VERSION CO960955.1 GI:51334139 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 641) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 722 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..641 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttgttcacga gatggcggca atcaaataca tcttgtgcgc aatcgcgctg cttgcactgt 61 gccagcccaa caacgcctac tacttcttca gctcctccct gaatgaggca ttcaaaggcg 121 tgttacccgg tgacgtgtcg gcactgtacg cccaatttga cgcggcagag ttggcgcagg 181 tgaagttggc cggtgcccag ttggataatg gcggcgacgc tgacgcactg cgcatcctgc 241 agcagatcaa cgagccgctg cactctcgtg tacttcaggc acgcgacggc atccaacaca 301 agattgactc tctgcaagtg gaggcgcacg actttgtgga gtcgctgatc gagcaggcca 361 gagcgttgcg cccaagtggt ggcgcagtgg agcaggcgga caccaagaag acgcggctgg 421 ccgctgccca catcatcaaa cagttgaatg cgctcagcgc cgaggcgcgt gccaatttgg 481 gacgcgtgtt ccccgaaatt gtgaccggca tcgagagcac ccaattccag gcgttggcca 541 atggacagag cgaattgtga gcagcggcag aagaagaagg gaaggggaca gaaaggaaaa 601 agactcataa agcactgact ttttggatca tgttttgatg c //