LOCUS CO960954 795 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15a12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O44738 O44738 F57B10.5 PROTEIN. [1], mRNA sequence. ACCESSION CO960954 VERSION CO960954.1 GI:51334138 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 795) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 799 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..795 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gggatgagta taaattttgt tccgccgaac aactgctgct gttcgctctg ctctacttgg 61 aactgtacgc gtatgcttct gagctcacat tcgaactacc tgacaacgcc aatcagtgct 121 tttacgaaga gatgaagaaa ggcattgact gtacacttga gttccaggtt gtcactggtg 181 ggcaatatga tgtggatgtg gttttggagg acccaaatgg tcgagttatg tataaggagg 241 cccggaaaca attggacagt cacccgtaca agaccgaagt tgacggaacc tacaaagtgt 301 gtttttcgaa cgagttctca accttttcgc ataaagttgt ttacatggac tggcaagtgg 361 gagctcctga attcactgga ttgcctactc cacgcgttgg aggtggaact tcacagatgg 421 aacgcagtgt tgagacgata gctgatcgac tcaggattgt ggacgactat caaacacatc 481 atcgtttgcg cgaagcaact ggccgaaaga gagcagagga tttaaatgaa cgcgtgacct 541 actggtcctt ggggcaaaca gcggtcgtgg tcataatcgg tattggacag gtgttcttgc 601 tgagatcttt tttttcggac agaaaaccag ctggatacta atggatgatc aattctattg 661 gtggataaat tatttgcttg tctactagtt tgtcgcatat tattttttgt caattatctg 721 caccagttat aaaaaagttt tgttcttgtt ttaaatagag cgatgaaaat tgaaaaagca 781 taaaaaaaaa aacaa //