LOCUS CO960950 678 bp mRNA linear EST 12-JAN-2011 DEFINITION pe15a05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO960950 VERSION CO960950.1 GI:51334134 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 678) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 682 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..678 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tgcgcatatc gcatttcatt tgccgcacat caaagttctc tctctctctc tcagcgcgca 61 tttgttgaaa acgaatagat ccgaaccgag catgggcgtg aacacggagc tgctccaaaa 121 acaggtgcag gcgctaaagc taagcaaaga gactggtggc gactactata aagagttgtt 181 cgcccaacac tcggatgtgt gcgacgcgta cgggggcatt gacccggacg cggtgcccaa 241 atcggccagg tacatcatga tggccaacaa cgaactgcag gccttcatgc aattgccgaa 301 gaacttcaac gaggaacgcg actggcgctc ggccctgtcc aacttcaagg agcactacag 361 cgacagcgac gtcccgctca aactctttaa caaaacaaag gagccgttct tggcgttgct 421 gcaaaagcac gcggggggaa tgagtgctga gcagaaaaag ggctgggagg agctgctgga 481 caaggcttac gccgacatga aaaagtacgg atggatctga gtggaactgg agacagccga 541 aaatgaatac aatgatatcg ctttcttgag tagtggcaaa gcaattcatc ctcggacaga 601 ttgatttgtt caattccttg acgaataaat ttatgcgctt aaaaaaaaaa aaaaaaaaaa 661 aacaaaaact cgagacta //