LOCUS CO898006 560 bp mRNA linear EST 12-JAN-2011 DEFINITION pe10d08.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:RS3A_HUMAN P49241 40S RIBOSOMAL PROTEIN S3A. [1], mRNA sequence. ACCESSION CO898006 VERSION CO898006.1 GI:51237796 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 560) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 394. FEATURES Location/Qualifiers source 1..560 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tgggcaagaa gggtgctaag aagaaggcgg ttgacccgtt caccagaaaa gagtggtacg 61 acatccgtgc tccggcaatg ttccagcacc gaagtgttgg caagacactc gtgaaccgaa 121 cccagggaac tcgcatttca agcgattttt tgaagggccg tgtctatgag gtttctttgg 181 gtgatcttaa caacactgat gccgactttc gcaaattccg cttgatctgc gaagaagttc 241 agggcaagaa ttgcttgacg aacttccatg gaatgacttt cactcgggac aagctctgct 301 cgattgtcaa aaagtggcat acgcttatcg aggctaatgt ggcagtgaag accacggacg 361 gctatctgct ccgtctgttc tgcattggct tcactatacg tagcctcaac aagatccaaa 421 acaccagcta tgccaagact tctcaagtgc gcgccattcg ggctaaaatg gtggagataa 481 tgctaaaaga tgtgtcctcc agccgattta cgctcatttg tctaacacct ctaattcccg 541 gactcctcga ctctaacgtc //