LOCUS CO897982 428 bp mRNA linear EST 12-JAN-2011 DEFINITION pe09h12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897982 VERSION CO897982.1 GI:51237772 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 428) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 468 Seq primer: SL1 primer High quality sequence stop: 409. FEATURES Location/Qualifiers source 1..428 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gcaaattcgg tcgctgttct ttctgctgtc cttcgccgcc agtgccgtga gcggccaaca 61 atttttccac gtgctcggtc cgagtggcct gttcggcatg aatctgaacg gcgccaacgc 121 ggccgagtgc aaacgcttct tcgacaacgt gaccgaggtg gagcagctga accaccacca 181 gttcaccacg ttcgagcact gcgtgttcta cttcctggcc aaccgagcgc agcagcagtc 241 cgcccaggcg ggagtccact tcggcgcaca agtgcaccca atcgcctcac tgccgcccaa 301 tttcgacgag gcaaatgggc ataaagaaac aataggatca gtcggaacaa atactgtgta 361 atttaattga tcaaaaacgg tcaaaccgcg tcgggaggat ttaaaggtcn aaaaaaaaaa 421 aaaaaaaa //