LOCUS CO897972 419 bp mRNA linear EST 12-JAN-2011 DEFINITION pe09g11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:BCAT_CAEEL P54688 BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE, CYTOSOLIC, mRNA sequence. ACCESSION CO897972 VERSION CO897972.1 GI:51237762 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 419) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 434 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..419 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cctacagccc agtttcatgc actttttcga caactgtttg tcgggctatg gcttcggtat 61 cgggcagtcg acaagcgcat catgcagcct cggacattgt cccaactccc gaagagaaac 121 ctgtcgacac attctatcac aaagacttga ttgttgaccg cgcttcgcca cttcaaatgc 181 agccaaagcc gtccagcaaa gaaattttga aattcggtca catattttct gatcacatga 241 tggaggtaga ctggagcgaa aacaacggat gggagcgtcc gagcttgtgt ccgttacaca 301 acatcagcct tcatccagga gccaaggtgc tacattatgc gattgagctg tttgaaggca 361 tgaaagccta cagggggatc gatgatcgga ttcggctttt ccgaccagaa aaaaacaaa //