LOCUS CO897960 403 bp mRNA linear EST 12-JAN-2011 DEFINITION pe09f09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9Y333 Q9Y333 SNRNP, mRNA sequence. ACCESSION CO897960 VERSION CO897960.1 GI:51237750 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 403) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 410 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..403 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 taggtctgct tttcttctct tttttcagtc aatggtgggg agggaagtgg tgattgagtt 61 gaagaatgac ctcagcattt gcgggacatt gcattctgtc gaccaatatc tgaacatgaa 121 gttgtccgac atatctgttg cagacataga aaggcacccg catatgattt ccgtaaagaa 181 ctgcttcata cgcggctcag tcattcgcta tgcgcacttg cctgtggatg gcatcgatac 241 tgcactcctg caggaagcgt cgagaaagga aattttgcag agtcgtcaac aacaagcagc 301 caaatagagt ggaataaatt tacaaacatt ttacaatgtt ttgatctccc accttgttgc 361 gaacggaaac aacatttaaa gcaaaaaaaa aaaaaaaaac aaa //