LOCUS CO897956 506 bp mRNA linear EST 12-JAN-2011 DEFINITION pe09f05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:CYC1_ASCSU P92504 CYTOCHROME C, TYPE-1. [1], mRNA sequence. ACCESSION CO897956 VERSION CO897956.1 GI:51237746 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 506) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 568 Seq primer: SL1 primer High quality sequence stop: 502. FEATURES Location/Qualifiers source 1..506 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 agctttttgc tgagactgcc aatggccgaa attcctgagg gtgactacga gaagggaaag 61 aaagtcttca aggcccggtg tctccaatgc cacgtgatcg actccatggc cacaaagaca 121 ggaccaaccc tgaatgggat ttggggaagg aaaagtggac aggtacccgg attcgactat 181 tctgccgcca acaaaaataa gggtgttgtt tggaatcgcg aaacgctctt cgaatacctg 241 ctcaatccaa agaaatatat cccggggacg aagatggttt ttgcagggct gaagaaggtc 301 gacgaaaggg cggatctcat caagtacatc gaggttgaaa gtcagaaacc gccagcatga 361 tgaattgacg catgagaggt tcatcgcccg tccacgacaa acaggatagt ttatagtcag 421 tcacgtgcga gacacttggt taaaattgtt tttcacctag acattttcac actctgaggc 481 cctcgtttct aagaaattgt tagttc //