LOCUS CO897955 578 bp mRNA linear EST 12-JAN-2011 DEFINITION pe09f04.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897955 VERSION CO897955.1 GI:51237745 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 578) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..578 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ccccgtttgg tagctcttgc tcgcctgcct gcctgtcaca tcgtgccgaa ttcaaactga 61 gcctccgcag caacaacgcg ccaatcttcc ccggtggtcg tgtgctcccc caaccgcagt 121 tgcctgagtc caatccgagt gccggagatt gtgccgagtt tgagccagat aacaacgacg 181 agaagcgaga gagccgagat gtttttcctg gacgaggaac aagagcacca atacctggag 241 atggaggagc tgatgcgcga ggagcagcag gagctggtgc tgggcgtccg ctacggcggc 301 aggctggacc aagagaaccg ccgcggctct gcactgctgg gcgaccccca agtcctcaca 361 gctggcaaaa acaaaagggc tcattccctt ttgcgccgac gtgtctctct tacagacgag 421 ttcacgtgat ttgtatgcga acgcagcagc tccaacgtga aatgcccgcg aagaaaacag 481 aaaattgtgc ggccggcccg ctcggctgaa ttggcgaggg accgaccgac caagcgagcg 541 ctggtcacga gcacacttat ccctccccca tccatttc //