LOCUS CO897944 516 bp mRNA linear EST 12-JAN-2011 DEFINITION pe09d11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897944 VERSION CO897944.1 GI:51237734 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 516) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 487. FEATURES Location/Qualifiers source 1..516 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttgcaatggc ttctgaggta gttgggcctt ttgccccact tggaccttac ggtgatcttc 61 cagatgatga gagttggctc gagactctcc gtcgtgaact tgcgaaatat taccctcaag 121 atgtcgacac ccagaaagtt cgagaggtat ttgccaatat ttctcaattt agcaaatacg 181 cagatacgaa agtcaattat ttcttggatt taaacatgtt cgaggaggca aaaaacgcca 241 cagggcttgc acgtttcgac acaaagtctt ttcttcgcat cctcggagca cttgtggcgt 301 tcaaggagtt ccgcgagatg tatgacatta gccaacaggc tgctaaagag attagtcgcg 361 cttgtattga caagatacaa gatcattttg atgaatatgc gatcgacgtg ttcaaaattt 421 ggaaacacta caacgaataa actttcctct caaaaaaaaa aaaaaaaaaa aaaaaaaaaa 481 aaaaaaanaa aaaaaaaaaa aaaaaaaaaa aaaaaa //