LOCUS CO897931 449 bp mRNA linear EST 12-JAN-2011 DEFINITION pe09c06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9XVW9 Q9XVW9 T28C6.8 PROTEIN, mRNA sequence. ACCESSION CO897931 VERSION CO897931.1 GI:51237721 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 449) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..449 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gttgataatg gggcatgcct ggtgatcact aataaaatgt ccggcatgtc atcgttcgct 61 gaccagacgc ttcacctgga ggggtctcct ctgggcaatc ctatgttttc cgtgcgggat 121 gttttgctgt atgaggagga agaagatgcg ctgttcagga tgcgagagtg aggtgattgt 181 cggagacggg agcatcccaa cccttgccca tgcttacaaa acactcaaag aatccaaatg 241 gcagttcccg aagaatcaaa gacaaacgag gggccaaagt caacgtcgca cttctcagat 301 ccaggcagca ggaccagaac gtcagcaagg gaacgatgcg caaaattatc aagtcatatc 361 cagcgtttga ttctactaat ttcaagtgca cttcatcccc tatttgttct tttgcccaaa 421 ccacgctaat tattaaatca gggacttcc //