LOCUS CO897894 533 bp mRNA linear EST 12-JAN-2011 DEFINITION pe08f10.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q93622 Q93622 F28C6.8 PROTEIN, mRNA sequence. ACCESSION CO897894 VERSION CO897894.1 GI:51237684 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 533) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 519. FEATURES Location/Qualifiers source 1..533 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 taatggtact aagtggcttt gcattctatc cgacacttgc ttacaattta tttcgaaatt 61 atgttcaacc aaagagttgg agttggtata cacgaattaa cgaatcactg attttgggcg 121 caatgccttt caactcaatg ttactggaac tcaagacaga ggaacaggtt ggaggagtgg 181 tttgttgcac agaggaattc gagctcgatg cagcttgggg ggcacttaaa tcagccgatt 241 gggcacatca tggcattgaa tttcaccata cgccaatgaa agacttcacc ggttctacct 301 cgcagcgaag catagcagag gcagttcatt tcatcgaccg aattactgca gagggcaaga 361 cttgctacgt ccattgcaaa gctggtagaa cacggagtgc cactgtggcc atttgctacc 421 taatgcaaaa atacgaccat agccctgaag aggcaatgaa tatgcttaca ttgaagcgcc 481 ctcaggttct tctacgtgaa atgcattgga gatctgttcn agagttcagg aag //