LOCUS CO897893 496 bp mRNA linear EST 12-JAN-2011 DEFINITION pe08f09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897893 VERSION CO897893.1 GI:51237683 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 496) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..496 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gtcccgtgtg cactttgtcg ttgttctggc cctcgccctg ttggcggccg tcgcccacag 61 tgcgccgatt gctgaggagc cccagcagca ggaccagtcc tccgcctccg acgacgggac 121 cctgagcgcg caggagatca ccgcgaagct ggacgagttg gcggaccagg tgcactccac 181 cctgctccag tacgtggacc gctacgtgga cgcggacgac tcgctggccg ccgaactgct 241 cgaccagtgc accaagcagt gcgaccagct gccccagctg gcacagcgcg ccctccagtc 301 cttcaaacag atgccggacg agcacaagca gacgctgaag gcgacgctgc gccgctcttt 361 cgacgagctg atgcagttcg gcgtcaaatt catggacgtg tgggcgccca agttcgacaa 421 cgcgctgacc gacaatgtgg tctccattct ggtcaagcag gcggcagaca ccactcgtca 481 ggactagttg aaccgc //