LOCUS CO897890 471 bp mRNA linear EST 12-JAN-2011 DEFINITION pe08f06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9U8J7 Q9U8J7 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE, mRNA sequence. ACCESSION CO897890 VERSION CO897890.1 GI:51237680 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 471) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..471 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 atctcgtcgc gtattttgca cactgggaag caattgagaa tgccggtcca aattgacact 61 ctgaaagagg gagaccagtc gactttcccc aagaagggcc aaaaggttca atgccattac 121 gtgctgacgc tggagaacgg acaaaagatc gacagttctc gcgatcgcgg aaagcctttt 181 gaattcacga ttggaaaggg cgaagtgatt cgcggctggg acgagggagt ggccaagatg 241 tcggtcggac aacgcgccaa actgaccatc agttccgaca tgggctacgg accgaaggga 301 attccgggaa ccatccctgg caatgccact ctgctcttcg acgtggaact gctcggagtc 361 aagtaaacaa ctggctgatg aagagaatga gccctctcaa gacggagatg acccatctat 421 cgtttctttt cttagtgtta aataaattgc cactgttttt taaaacgccc a //