LOCUS CO897885 633 bp mRNA linear EST 12-JAN-2011 DEFINITION pe08f01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9XVF7 Q9XVF7 B0250.1 PROTEIN. [1], mRNA sequence. ACCESSION CO897885 VERSION CO897885.1 GI:51237675 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 633) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 543. FEATURES Location/Qualifiers source 1..633 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gtttaaaata atatcaaaat gggccgtcgc atccgagcgc agcgaaaagg gcgtggagga 61 atcttcaagt cacacagcaa gcatcgcaag ggacctgcaa aattgcgtcc ggtggactac 121 tcggagcgtc acggctacat ccgaggaatt gtcaaagata tcatccatga cccgggtcgt 181 ggtgcaccgc ttgctattgt gcaattccgc gacccataca aatatcgggt gaagaaagag 241 acaatgattg cggccgaagg attacacaca ggacagttca tttattgtgg aaagaaagct 301 caagtccaaa ttggcaatgt gatgccgata ggcgaattgc ccgaaggtac cactgtgtgt 361 aatttagaag agaaagtcgg agatcgaggc cgtctggctc gaacttcagg caattatgcc 421 atcatcatcg ctcacaaccc agagagcaaa cgtactcgta ttcgtttgcc atccggtgcg 481 aagaaggttg ttccatccgc caaccgcgcg atgatcggga ttgttgccgg tggcggtcgt 541 acagaccagc cgttgctgaa aggccgaacc ccccaacatc tttacaaggg ctaaccgcac 601 gcttgcccaa aatgcatggg tgtgacaata aac //