LOCUS CO897880 565 bp mRNA linear EST 12-JAN-2011 DEFINITION pe08e06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to WP:CE25457 Y54G2A.O, mRNA sequence. ACCESSION CO897880 VERSION CO897880.1 GI:51237670 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 565) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..565 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tgattactga tattatcaat tatcatttaa tattagacta cattcaagaa aatggcattg 61 ccacgacgca tcacaaagga aactcagaga ctgctccaag accccgtccc gggaatttcg 121 gccataccgg atgaggccaa cgcacgctac tttcacgtta tcattgcggg tcctgatgaa 181 agcccatttg ccggtggcat tttcaagcta gagctgtttc tgccagagga atatccgatg 241 gcggcgccaa aagtgcgctt catgacaaaa atttatcacc cgaacattga caagcttggc 301 cgcatctgtt tggacattct caaagacaag tggtcgccgg cattgcagat ccgcactgtg 361 ctcctttcaa tccaggccct gttgtcggcc ccgaatccgg acgacccgct tgcaaccgac 421 gtggcggagc agtggaaaag caacgagact gaggcgatcc aaatcgctcg cgaatggaca 481 cgactctacg cgggcgagaa ctgagcattg gccagggcac aggaaaataa gaggaataaa 541 aagaataaat tgacaattga ctgtg //