LOCUS CO897874 628 bp mRNA linear EST 12-JAN-2011 DEFINITION pe08d11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:BTF3_CAEEL Q18885 TRANSCRIPTION FACTOR BTF3 HOMOLOG. [1], mRNA sequence. ACCESSION CO897874 VERSION CO897874.1 GI:51237664 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 628) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..628 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tgggtttacg ttcgagtttt atagttggtt tttataattt gtttattggg ctctcctatt 61 cgttcacaac ctacattgcc gtttaaaatg aatgccgaga aagtaaagaa gcttcaacaa 121 aatgccgagc atgttcgtac aggaggaaag ggtactgcac gtaggaagaa gaaggtggta 181 cacaagacca ccgcaatgga cgataaaaaa ttgcaaagca acctaaagaa actctctgtg 241 accaacattc cgggtattga agaagtcaac atgatcaagg acgatggaac cgttatccat 301 ttcaacaatc cgaaggtgca agcctctgtg ccagcaaaca ctttttcaat cactgggact 361 gcggaaaaca aacagatcac cgacatgctg cctggcatcc ttaaccagtt gggcgctgaa 421 tctttgactc acttgaagcg gctggccaac aacactaccc aattcaaagc cactgaagat 481 gacgatgtgc cagatcttgt cggagatttt gaggaagctt caaagaacga gtcnnagacc 541 accgggactg ctgcggacac caatgttaat gccgtcgaat aaaatagcca atttgctgtt 601 gacgatggaa caaattgatc agattttc //