LOCUS CO897869 404 bp mRNA linear EST 12-JAN-2011 DEFINITION pe08d05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9Y0V6 Q9Y0V6 SMALL ZINC FINGER-LIKE PROTEIN, mRNA sequence. ACCESSION CO897869 VERSION CO897869.1 GI:51237659 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 404) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 439 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..404 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ctcaaatagc ggtagctcac aggcgaatgc gctacaaatg gtggcagatt tggaaattga 61 gatgatgact gacatgtatc ggagaatgac aaagagctgc caagagaagt gcgtcgacac 121 aaattatcgc gagggagacc taacaaaggg tgaagccgtc tgtttagacc gctgcgtcgc 181 gaaatacttg gaggttcatg accgactagg caaattgttg acacaaatga cgcaacagga 241 tgagaagaat ttgcagcagc aacaaaattt ggcagcgata gcacaaaaga cccacaagtg 301 aacctttttg cacttttttt cacttagagt tggatcatcc agtctacata aatttgatgt 361 ctgcggataa aagtaccgtt aaaaaaaaaa aaaaaaaaaa aaaa //