LOCUS CO897865 385 bp mRNA linear EST 12-JAN-2011 DEFINITION pe08c09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains PTR5.t1 TAR1 repetitive element, mRNA sequence. ACCESSION CO897865 VERSION CO897865.1 GI:51237655 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 385) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..385 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 aatatttgca catcggccac aaaatgccct ccctgctgca gaaggctcgc gttttgccgg 61 ttattccgga ggacgaaagc gctccctcca gcagagggtg gactgccaaa ccggcaaagg 121 cgaccactgc aggcggagca gtcggcacct cgcaaatttg gttccgccct cggtcccggc 181 agctggtcag caggccgttc cggccgagga ccttgctgcc gctggagacg cccactcggg 241 cgctgcaccg caaaatcaag gcggcggagc agagtctgga cagcatatcg gagcaagagt 301 tggacgggga gaaggaggat gcgtttgatt gacttcgaac cggcaatcgc aaacattgta 361 aaatgccatt aaccactgtc tgctt //