LOCUS CO897863 404 bp mRNA linear EST 12-JAN-2011 DEFINITION pe08c07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q21581 Q21581 COSMID M60. [1], mRNA sequence. ACCESSION CO897863 VERSION CO897863.1 GI:51237653 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 404) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 397. FEATURES Location/Qualifiers source 1..404 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 acaacctctc cttcaacacc gcctacctga gcaccaatcg gggcatcatc aagattctgc 61 agatcatttt cgggctgatc tgttgctcgt tgctctgcgg gaactggtac ggagggcagg 121 catgcttcta taacgacggc cgaatgggct tcgtgagcgc agtgaacttc gtgatcgtga 181 tcatcaacat cgtcatgttc gtcctgaacc tgctgaacgt ggccgtctac agaatggagc 241 gcatctacac catcgtgggc atgatcctgt tcatcatcgc cttcgccctg ctgctctggt 301 tcctgctgga gtacagccgc taccccagct atttgctcgc cgccaccgtg ttcatcggca 361 tccagatggg actcttcatc tgggactacc agattctgca tgga //