LOCUS CO897855 540 bp mRNA linear EST 12-JAN-2011 DEFINITION pe08b09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q20901 Q20901 F56H11.4 PROTEIN. [1], mRNA sequence. ACCESSION CO897855 VERSION CO897855.1 GI:51237645 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 540) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..540 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tcccgcttct gcccaatgcc ggctgactcc gttccggtcc cctccctgtg ggagaatgtg 61 actgcggcgc cgcacttcga gccggccacc ttcttccact tgctcaccgc cgccgagttc 121 ccagagccgg aggctcgcaa atggattgac gcgcggtttc ccctgaccat ccagatctcg 181 atcgcttacg tgctggtggt gttcggcacg cgcttcctgc actggtacca ccacatcctg 241 accatgctgt acgccttcta ctcctacccg atcacgcccg ccttcaaccg ctggggcatc 301 ttcctcaact atctggtcca ctcctacatg tacacgtact acttcttgcg ctcaatgaaa 361 atccacgtcc ccggcccggt ggccaaattc gtgacgacca tccagatctg gcagttcatc 421 atctcggtgg ccatcctctg ccacctgggc ttcatcgttt ttgcccgaaa cgtgcaatgc 481 gacctggacg ggcgggtgtt cgcgttcgcg gtgggcatgg acgtgtccta cctggtgctg //