LOCUS CO897839 346 bp mRNA linear EST 12-JAN-2011 DEFINITION pe07h12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains element TAR1 repetitive element, mRNA sequence. ACCESSION CO897839 VERSION CO897839.1 GI:51237629 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 346) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 307. FEATURES Location/Qualifiers source 1..346 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ggcagctggt tctccgttct ccggtatgtc cccactccac aaaataactt tggccgccct 61 actggccaca gtgctcgaat caagcccttt gccctttgac ggcaggcagt acccgtccat 121 cgacctgagg ctcgtgggct ggccattggc ggacgaaggc gcagaatcga ggggcgacca 181 acaggcgacg cggctgcagt gctacacgga gctggacgcg tcgtttgtgg acgggcagag 241 gctgtaccgg ctggagagcg gcggccagcc ggagggtcgg tcctgcctgg tgcgcgtggc 301 gaccggcnct cggctgaccc tgtcccggat gggcnccgcc ngccct //