LOCUS CO897828 505 bp mRNA linear EST 12-JAN-2011 DEFINITION pe07g01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q94539 Q94539 PUTATIVE RNA-BINDING PROTEIN. [3] TR:P91680 TR:O02392, mRNA sequence. ACCESSION CO897828 VERSION CO897828.1 GI:51237618 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 505) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..505 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tcaactaaac cttaattggt caacatcttc tcaaatctca tctatatgac tatggactat 61 cttgctgaac tcatccgtga aaagagcact gtggcggcat ttcccaatca cttcaaacat 121 gttgatcgct taatagactt ggaaattgct cgagttcgcg ctcagctctt ccaatgcagc 181 tttgacttct ctgagctctt gaagcacatc gatgcctgaa tccgaatcca ccttctatca 241 cgatattaat catatcgttg cagtcgtttt tgtctctaaa ttaagtggcc tctgtctctc 301 tctctctctc tctctctgcc catctaatcc cccttcaatc tctctatcgg catttccctt 361 aagtcgaggc tataatccaa aaaataagtt ttacccccca taatcgataa tttaaagtaa 421 tttaagttgt ttcgcttaag cgataattaa tgttcacgca taaattggtt gtttgttgtt 481 gccctctcac gatgatactg ttgaa //