LOCUS CO897817 432 bp mRNA linear EST 12-JAN-2011 DEFINITION pe07e12.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q21265 Q21265 SIMILAR TO METALLOPROTEINASE INHIBITOR 2 PRECURSORS. [1], mRNA sequence. ACCESSION CO897817 VERSION CO897817.1 GI:51237607 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 432) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..432 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 atgtgtttgt tcggcaccgc cattttgttc tgctcgctgc actattcgtc cttctgccgt 61 ttccccgagt ggagacgtgc aagtgcaagc tgtcttcgtt caaccaaacg atgtgtgagg 121 ccaaatgggt ttcccatgtg agcgtgctga acaacgagac cactgcccac tccgtcaact 181 acactatgaa gttcgtcgaa gtgttcaagg cgcccaacgg gactcagatg gcgggttcca 241 ctcgcagagt gctgaccccg ctgcacgacg ccgcatgcgg ggtgtcggat ctgcagccgg 301 acagggacta cttgttggcc ggcaatgtgg acgatgggga cctgctgcgc atcattcgct 361 gcctgtacgt accgctagcc gatggaagcg ggaatcctat ggccgctcgc gattgggacg 421 cagtaccgga cg //