LOCUS CO897809 523 bp mRNA linear EST 12-JAN-2011 DEFINITION pe07e03.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:RS3A_CAEEL P48154 PROBABLE 40S RIBOSOMAL PROTEIN S3A. [1], mRNA sequence. ACCESSION CO897809 VERSION CO897809.1 GI:51237599 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 523) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 416. FEATURES Location/Qualifiers source 1..523 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ggcggtcgga aagaacaaga agatgggcaa gaagggtgct aagaagaagg cggttgaccc 61 gttcaccaga aaagagtggt acgacatccg tgctccggca atgttccagc accgaagtgt 121 tggcaagaca ctcgtgaacc gaacccaggg aactcgcatt tcaagcgatt ttttgaaggg 181 ccgtgtctat gaggtttctt tgggtgatct taacaacact gatgccgact ttcgcaaatt 241 ccgcttgatc tgcgaagaag ttcagggcaa gaattgcttg acgaacttcc atggaatgac 301 tttcactcgg gacaagctct gctcgattgt caaaaagtgg catacgctta tcgaggctaa 361 tgtggcagtg aagaccacgg acggctatat gctccgtctg ttctgccttg gcttcactan 421 acgtagcctc aacccgattc aaaagacccg ctatgcgaaa acttcgccag tgcgcgccat 481 tcgggcctaa atgggggaga aaatgcaaaa ggaggtgtcg tcc //