LOCUS CO897796 514 bp mRNA linear EST 12-JAN-2011 DEFINITION pe07c09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897796 VERSION CO897796.1 GI:51237586 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 514) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 522 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..514 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 actcacctct cggacgcttt agggcacgag agcgaacttg gacgagtcga gcggcgccca 61 tctcgactgc acggcgaatg gcgttcatcg catggaacag cacccccgag gaggtggatg 121 cgcccgccga agcggaggaa ccgaacaaca atggaacaat gcaaactggg agcagcgctg 181 aggaagaagt gaagagcgcc attcggccaa cagacggaac aacaacaaca gagcaagaag 241 gaaacggacg aacaacaaaa acaaagcaca gccgcagagt ctttctcgac gcattcggca 301 cccccagcag agtctttcac aagccattca ttttcggtct ttcatccccg caatccacca 361 tttgttgccc gcaccccaaa agcccaaaaa cagaactaca aacacacaca aacacaattg 421 tcgcggtcag cactgtgccc ggaggactgt gaccaaaaca tgccctaaat gtgcgaatga 481 ataaaacgga ttcaccacaa aaaaaaaaaa caaa //