LOCUS CO897790 519 bp mRNA linear EST 12-JAN-2011 DEFINITION pe07c01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897790 VERSION CO897790.1 GI:51237580 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 519) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 495. FEATURES Location/Qualifiers source 1..519 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gagttgcgca tatcgcattt catttgccgc acatcaaagt tctctctctc tctctcaccg 61 cgcatttgtt gtaaaacgaa tacatccgaa ccgagcctgg gcgtgaacgc ggagctgctc 121 caaaaacagg tgcacgcgct attgctaacc agaaacactg gtggcgacta ctataaagaa 181 ttgtacgccc tacactccca tgtgtgcgac gcatacgggg gcattgaccc agacgcggtg 241 cccgattcgg ccaggtacat cgtgatggcc aatgacgaac tgcaggcctt catgcaattg 301 ccgaacaact tcagcaaaga acgctactgg cgctcggccc tgtccaactt caaggagcac 361 tacagcgaca gcgacgtccc gctcaaactc tttaacaaaa caaaggagcc gttcttggcg 421 ttgctgcaaa agcacgcggg gggaatgagt gctgagcaaa aaaagggctg ggaggagctg 481 ctggacaagg cttacnccga catgaaaaag tacggatgg //