LOCUS CO897789 458 bp mRNA linear EST 12-JAN-2011 DEFINITION pe07b10.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9ZPP6 Q9ZPP6 LIM DOMAIN PROTEIN PLIM-2, mRNA sequence. ACCESSION CO897789 VERSION CO897789.1 GI:51237579 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 458) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 482 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..458 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cgcagctgag ccagacatca aggattgtgc gcagtgtggc aacaaggtcg agcacactga 61 taaaatgatg gtggacaggg agacagttca caaagactgc ttcaaatgca gcctttgcgg 121 cacaaaactg caggtgggat tctgcgccat ggatcaagcg ctctacgggc gctatggacc 181 ccgctggtat tgctccctga tctgcgctca tgaaccgctc ggcaagaagg aggcaaaact 241 gaaggagcag ggcattgagg tcagaaagcc gaaatcgaaa aattaattga gccgcagaga 301 agagagtgga aggaagcaac aatttgccct gttgaactgt gaattgaaac aataacaagt 361 gccagtaata ttttatgcag atgctcttcc tattcctaac gaataaattt tttagaataa 421 tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaacccaa //