LOCUS CO897788 661 bp mRNA linear EST 12-JAN-2011 DEFINITION pe07b09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to WP:CE24630 Y71H2B.3, mRNA sequence. ACCESSION CO897788 VERSION CO897788.1 GI:51237578 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 661) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 581. FEATURES Location/Qualifiers source 1..661 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cgagcgcacg ctcgaacagg aatttactta ttgcgaagga accatagagg atctgattgc 61 tgatcgactc ggggattcga gattacctga aagaaatgag agactgaaga attgcgtgca 121 tacactgcag tctctaaacg atctcacaaa tgaactttct ctgttcagca caaatgacca 181 ggctgaagag ttgccaacga gttcacttcg ttacctgctc ataccagttt atctggccta 241 tacaatgcaa gagatacaag tgggaatgga tgagcgcaaa tcctacctca aagcagcgaa 301 gtcatactat cgggaatatc tgcaaaacct tttggttttc gagctcatca actttaaact 361 tccttggatt gattcggaga gaggcgataa agaaggcaat tctggtatcg atattccgcc 421 agttagcggt ttcaaagaag cgaccgcccg acgagagaag aaactaactc gtttgaatca 481 aatgaccgag cttgagaaag cgctcgtgaa acttcggatt gaacatacac gaaacgatga 541 cgaatttaca caaagagaat tgataataac tctcttgcgc ctaagggcta ttggcactca 601 tcacgaactc gataaatttg aagaagaact aacgttactc gaacatttgg aaacgagatc 661 g //