LOCUS CO897782 468 bp mRNA linear EST 12-JAN-2011 DEFINITION pe07b02.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:P90976 P90976 LIN-7 ;contains element TAR1 repetitive element, mRNA sequence. ACCESSION CO897782 VERSION CO897782.1 GI:51237572 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 468) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 547 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..468 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cgtcagagaa catagctaat aagccaacaa attgacaatg atatagagca gataatcgtg 61 atgttgctgc gtagattgaa tctgtcgccg tctctgacct tttaccgtta taaaatgaag 121 cccccctcga acatccccta ctccggcatc taccggacca atggcgacat ctgcagaagg 181 gacgaactgc tggtgtgtca acggaagatg aactatcacc ccggcgccaa tgtccgtcac 241 cagccagatc ggggccaaca cttgctgaag gcgaactgcg acgggactgt ggtgatcaca 301 cgcgagcact gccaagtgga cgagaacaac gaatggatgc aaaagttcta cgcacatcgt 361 aactttgagc acatctacaa actcacgttc aatgttatcc cccgtaagat gtctacttca 421 tttactctag ttagcacaga gtgaataaat ttattttact aaaaaaaa //