LOCUS CO897780 482 bp mRNA linear EST 12-JAN-2011 DEFINITION pe07a11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9VT06 Q9VT06 RPS9 PROTEIN, mRNA sequence. ACCESSION CO897780 VERSION CO897780.1 GI:51237570 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 482) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 448. FEATURES Location/Qualifiers source 1..482 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gagtaaagca cgtattttct aaagtctatg acgtgcctcg tcgtccattc gagagagagc 61 gacttgatca ggagctcaaa ctcattggtg agttcggtct cagaaacaag cgagaggtgt 121 ggcgtgtcaa actgacgctg gccaagatcc gaaaggcggc ccgtgagctg ctgactctcg 181 aggacaagga ccaacgacgc ctgttcgaag gcaatgcgct gctccgtcgt ctggtccgag 241 ttggcgtgct gcccgaggac aaaatgaagc tcgactacgt gcttggtctc cgcgtcgagg 301 acttcttgga gcgtcgtttg cagacacagg tgttcaaact cggactcgcc aagtccatcc 361 accacgcacg tgtcctcatt cgccaaaagc acattcgtgt gcgtcgacag gtcgtgaaca 421 tcccatcgtt cattgtgcgt ctggactcgc agaaacacct cgacttttca accaagtctt 481 cg //