LOCUS CO897773 491 bp mRNA linear EST 12-JAN-2011 DEFINITION pe07a01.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897773 VERSION CO897773.1 GI:51237563 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 491) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 519 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..491 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 acgactaaca acggatgtcg ctgtacagga cgacgtgtac gagacggagg acgcgcctcc 61 ggccgaggag ccggctgttg ctgaagagca gttcgagcac cccgaggtgg agaagatcca 121 cttggacgtg aaccgggcga ggaagcactt ccaaatcctg gaggcggaca tgaacgtgga 181 gcgcctggag gagacattcg agcagaagtt cgcacgtttg cgcgaagagg tccaagcgtt 241 ggtggaggag gccgaacgga gggaggccgc cgaagtgccc gcggtgaaca gagaggagat 301 cgccggcctg agggacccgc tgaagtcggt ggcccaaaag aaggccaagt ccatcgagaa 361 gacgaaacag cagaaagcgg ctgaacagaa ttgagatcaa ctgtatatcc aatttatgac 421 ataaccacct gttttataaa tcagtggcta ccttggccat tatgccgcat aaagaatatt 481 acgaaaaaaa a //