LOCUS CO897772 549 bp mRNA linear EST 12-JAN-2011 DEFINITION pe06h08.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897772 VERSION CO897772.1 GI:51237562 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 549) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..549 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 agcatctctt tatagaactg gcgaatcatc gtcatctagc gaaaaaggcg ataaagcaga 61 aaatggcgat aaatcaagca cttctagtat taaaccggac acttccccaa gcactgggcg 121 ggtatcatcg accaaaagtg ttacattcag ttctgatatt gaaatacgcg aattcaatga 181 ttcgatgaac accgttagcg aagaaaatga gttgaaaata ccgctgggac ttctcggttc 241 atacgtggaa aagcttgata agcgcatgga taaacttgat aagcgcatgg ataaacttga 301 ggatcgcatg acagatggat tcgagcggat agaatcaaga cttgaccgcc tctttgggaa 361 aaacaaggac aacgtttcta cagggttcga acgaaattgc gagaaatggc tccaaaaaag 421 gaacaaggga agacaatttg aacgaaatta catgcttgaa tgtccggaag aagaatacaa 481 gatcgaagaa ttggacattt attctgagcc aagaacacag agagagcccc atattttggc 541 ggagtgcac //