LOCUS CO897728 600 bp mRNA linear EST 12-JAN-2011 DEFINITION pe05g09.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q20913 Q20913 F57A8.2 PROTEIN. [1], mRNA sequence. ACCESSION CO897728 VERSION CO897728.1 GI:51237518 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 600) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 542. FEATURES Location/Qualifiers source 1..600 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 tccgaattgg tcgtactcgg attcaacgct ggtgacttca actcataccc gtatgctgga 61 caacagcaac agccgaacga tttctcttat ggtcaatata tcgccccgct ccagaggcaa 121 ccctatcctc cactacaaaa aaatgttcct gcatcaccac caaattccca gtttccgccg 181 caaatcgacc ctcaacaatt catgtacgat ccgttgttga acacagctcg ccaattggga 241 gggcagtttg cagagcaaca aaagcaaaaa ttctcgcagt atttgtccac attcaatttg 301 aagtattatt ttgctgtgga caccaattat gtcaggagga agttaacaat cattctattt 361 ccatttatac accgagattg gacgaacaaa tttaccgctg gcgataagcc tgtgaccccg 421 tgtgaagatg tgaatgctgc tgatttgtac atacccctaa tggccttcat cacatacatt 481 cttgtctcca gatttgtctt tggcgtccag aaaaggttta cacccgaaaa gttgggcatg 541 ctgaacacga atgcgttgtt ctacttgccc tttgaaaatg tggtagtctt cgtgaagaaa //