LOCUS CO897712 744 bp mRNA linear EST 12-JAN-2011 DEFINITION pe05e07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O01542 O01542 CODED FOR BY C. ELEGANS CDNA YK66C9.5. [1], mRNA sequence. ACCESSION CO897712 VERSION CO897712.1 GI:51237502 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 744) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 349. FEATURES Location/Qualifiers source 1..744 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gcgtctcgca ctactgccgg aggtattggt ttccaggttg tggccaagca ggcgagcaaa 61 tacagcaacc aggagggaga gatgtgcctg gcctggcatc aagaaaatga gcggcgagaa 121 tatcagcacc aacggcgacc gtgagaactt ctacaaattg ctaagagacg gcacactact 181 gttgcaagct ggccaacggg attcaggcgg gctccgtcaa gaagatccaa cagccgactg 241 gcaccttcgc ctgcatggag aacatccacg ctttcctgtc gttcgcgaag agccagggag 301 tgcccaccga ggagaccttc cagagcgtgg acttgttcga ggcacgtgac ctctactccg 361 agtgcatgac cccgttgcca ttgagaccca cctatagtat aacacagaaa gtctttccat 421 ccatcatcgt tatgattacc gacgaacaaa tgattacttg atttactata aaatgaatat 481 aaataaaaat tacaatagaa catatcaaca gtaaagctaa actctttaca actataccat 541 atacctacta atagttctca ttggcccccc tgaatctatt tcataccatc atcaccagca 601 cttaattctc ctcgatttaa gtcatataaa agattaataa actacccata ccttaagatc 661 cctcttattt taacgactaa taacgcctat tagcccaaat tctcaccacg ccaaacgcct 721 ctccatacct actcccctcc cgtt //