LOCUS CO897706 398 bp mRNA linear EST 12-JAN-2011 DEFINITION pe05d10.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O01869 O01869 SIMILAR TO 40S RIBOSOMAL PROTEIN S10. [1], mRNA sequence. ACCESSION CO897706 VERSION CO897706.1 GI:51237496 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 398) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer High quality sequence stop: 393. FEATURES Location/Qualifiers source 1..398 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 aataattcag cattcgaggt acccaactca aaatgttgat gcctcaatct gatcgcaaga 61 agatatacga acatctgttc gaagatggcg tatgtattgc caagaaagac tatgtcctga 121 agtcacaccc agaaatcaag ggagtgaaaa acctctacgt tatcaaggct ctcaagagtt 181 tggtatctcg tggactggtg aaggagcagt acgcatggca ccactactac ttttatctct 241 tgccggatgg cattgtctat ttgcgcgatt acttgggact cccagacgac gtattgccca 301 acacgcacaa acagagggtt gacccagctc gacaggcatt tgctgacaag ggaggacgtg 361 gacccatccg aagtgacaac cgtgcaggct atcgtgcc //