LOCUS CO897643 378 bp mRNA linear EST 12-JAN-2011 DEFINITION pe04d06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains element OFR repetitive element, mRNA sequence. ACCESSION CO897643 VERSION CO897643.1 GI:51237433 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 378) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..378 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 agtgcctttc tcaggcgaga gtaaaaatct tgtcgtccat tccaaaaaat tttccaacat 61 ggatcaattc atcagggact tcaaaaggct gcagactttt ctggagcgcc tcaaggaacg 121 tgtagaagtg gcaatggcag agaaggacga atttattgca cagttgcgag atgaaattca 181 gcaattgaat ggagagctaa ggcaaatacg aaagcaaagg gaagaattgc tcgaacaaat 241 acggtcgtcg ggaagtgaga gcgtggacta atcgtagtgg cggaatgttt aacaattggc 301 ataaggttta gaccctagca tatttatggt ttggataaaa cccgaatttg cgtgaaaaaa 361 aaaaaaaaaa aaaaaaaa //