LOCUS CO897641 337 bp mRNA linear EST 12-JAN-2011 DEFINITION pe04d04.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O45499 O45499 F39B2.6 PROTEIN. [1], mRNA sequence. ACCESSION CO897641 VERSION CO897641.1 GI:51237431 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 337) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Trace considered overall poor quality Seq primer: SL1 primer Sequence considered overall poor quality. FEATURES Location/Qualifiers source 1..337 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gaccaagaaa cgacgaaaca acgggcgaaa caagaacggc cgtggacacg tccagcccat 61 tcgctgcacc aactgcggac gctcctgccc caaggacaag gcgatcaaga aatttgtggt 121 ccgcaacatt gtggaggcgg ccgcagttcg cgacatcact gatgcttcga tttacgaaca 181 atacgctctg ccgaagctgt accacaagct gcactactgt gtttcgtgcg caattcacag 241 caaggtggtg cgcaaccgat cgcgtgaggc tcgtaaggac ccaaacccgc cgccgcgctt 301 ccgacagcgt gcggcccctg accgcccgcc tcgtcct //