LOCUS CO897634 457 bp mRNA linear EST 12-JAN-2011 DEFINITION pe04c05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O77095 O77095 HIGH MOBILITY GROUP PROTEIN 1.1. [2] TR:Q9U2A0, mRNA sequence. ACCESSION CO897634 VERSION CO897634.1 GI:51237424 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 457) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 494 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..457 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 agttcaagtg aagttgtcaa caaagctaat ggcgaaagca ccgaaatcca ccaaggatat 61 gaatgtgccg aagcgaccat tgactgctta cttcatctgg ttgcaagcaa accgaggggg 121 tttcacgaag ccaggaatga gtgcagctca ggtggcgaaa gttgcaggcg cggcgtggaa 181 gaagatgtcg gcagcggaca agagtgcctg ggagaagaag gctgccgacg ataagaagcg 241 ttacgaccag gagatggacg cctacaacaa gcatcactga gcagcgatgg ctgagtggac 301 atcatgactc atgatatttt gccttatcta aagaaacaaa cgataattcg atcgatccac 361 tttatttaaa tgtatccacc ttatttaagt gtttctcttt ggatttacga ttgcctaaca 421 atcaactctt tgattacaag gtcctcattc gataaac //