LOCUS CO897628 511 bp mRNA linear EST 12-JAN-2011 DEFINITION pe04b10.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q9Y5V0 Q9Y5V0 HSPC038 PROTEIN, mRNA sequence. ACCESSION CO897628 VERSION CO897628.1 GI:51237418 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 511) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 560 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..511 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 cgtagagcca taaaagagcg aaatggcgcg gggccatcag aaagcacttt cgcagcagaa 61 gaatcagcaa aagcaacagc agatgaagaa acagcagggc agtgaccaga aggcggctgc 121 cgcaaaagca ctcaatttca aatgcgccgt atgcatggcg ttgatgcccg atccgaagac 181 ctacaaacag cacttcgagt caaaacatcc aaagaacccg cttccgccag aattggccga 241 tgtgcaggct taaaagcata atggatggat atgaagagtc gttcgtgaat gctggcggct 301 gtcttcaatc ttgcgaaaaa atgaagtgtg ataaaaataa tttatgtaaa gataaacatt 361 ttgttgggcc tcgtactgaa agaagaaact tacctatttg ccttctaaaa acgatcgctc 421 gctttcactt tgtatcagtt tcgactttca aatgcccctc cctctggtcg ggagacattt 481 atgcaattca ataaataata attatcgcaa a //