LOCUS CO897627 389 bp mRNA linear EST 12-JAN-2011 DEFINITION pe04b08.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:Q17754 Q17754 C06G3.11 PROTEIN. [1], mRNA sequence. ACCESSION CO897627 VERSION CO897627.1 GI:51237417 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 389) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 390 Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..389 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 atgggtaatc cgacacagaa actgatctcc ggactttccg cgattttctg cttcatacaa 61 cgcagttacg gagcaatgct tcaacgcgtg tgtagtggac tttacaggca ggaatatcaa 121 cgagaaggag gagcggtgtt ccaagaattg tatggacaaa ttccttaagg ccggacaggt 181 tgtcgatgcg tttccaggag tatcagttgc tcaacatgga ggcccaaggg gcgcctgttg 241 cggccaccaa gaacgcgcaa ccgggaacgt gatactaggc atatgctagc gcccacacta 301 cttgttaact tttcttttgc tcaatttttg aatagtccga acagcacaag taaagttgtt 361 aaatagaaaa aaaaaaaaaa aaaaacaaa //