LOCUS CO897626 535 bp mRNA linear EST 12-JAN-2011 DEFINITION pe04b07.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5', mRNA sequence. ACCESSION CO897626 VERSION CO897626.1 GI:51237416 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 535) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..535 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttattatggc ttctttcact aaatcacaac gaggtggatt taaattggtc tacgaaggat 61 ttatttacac caagcacgga actggttcca gcggtcaaac ttattggaga tgtgagaagt 121 tccagagtag caagtgtcca ggaaaggcaa taactaagaa tgaaaatgaa gttgaagtca 181 cccaacaaca caatcacgcg tattcaccaa ccgatattga agttgcgcat atcaagtcca 241 gaataaaggg agatgcagct acaacaccgc ttgcaccacg ggccataatc aacaacaatt 301 tgcaagggat cggtgacaga gcaaaggttg cattgccaaa actcaagaat ttggaaaaga 361 cagcgtcccg taaacgaaag gctgaacgag gcggtgaacg cgtgccaaaa acattggccg 421 acatcaacat cccggagcgg atcagacgaa ccagaacagc aataccagag gactttgtat 481 tggctgatac cggcgcaaat gatccacaac ggttgatcat tcttggatcc cggac //