LOCUS CO897615 488 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03h11.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to contains element MER22 repetitive element, mRNA sequence. ACCESSION CO897615 VERSION CO897615.1 GI:51237405 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 488) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Putative full length read The vector to vector length is 545 Seq primer: SL1 primer High quality sequence stop: 471. FEATURES Location/Qualifiers source 1..488 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 ttaatccaaa aatccattca cgctgtcctt tccgcgacaa tcgaccacta aaatggccca 61 gttcctgtac gcatttctcg cctccctact cctaggtgtg gtgctcttcg accgaaatgc 121 gatgggacaa cagttcgcag agttcggggt tgccggccct gaaatgatgg acctggacta 181 cggtagcatc aatgacattg agagccttgt gaagagagcc tcgttggacc gatcggcgat 241 ggccagattc ggcaagcgcg caccgttgga ccggtcggcc atggccagat tcggcaaacg 301 cgcgccactg gaccgatccg cgatggtcag attcggaaag cgagcccctc tcgaccgatc 361 ggcaatggcc agattcggaa agtgaagtga cagagcgagc ggtgtggcgc attttttata 421 aataagtgtg aaggaagcaa gcacaatcta acatgttcac acaaacacac tctttggatc 481 aacagtta //