LOCUS CO897610 608 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03h06.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to SW:YQF4_CAEEL Q09269 HYPOTHETICAL 16.0 KD PROTEIN C34C12.4 IN CHROMOSOME III. [1], mRNA sequence. ACCESSION CO897610 VERSION CO897610.1 GI:51237400 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 608) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..608 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 aattcatagt caactgctac acaaatgtcg gatccgtgcg aatgcatctt caaccatgaa 61 gcgattatgc gacggattct gtctatcttg caagaagccc aaaccgattg caccaacacc 121 gaatgttcga ccgggccttc cgatgctggt gctggcggtt cgaacatgat gctcattgcc 181 atggcttggg gactgttcgc gatgttcatg ttcatgatgc gtccggcctc gatgcgcagc 241 tcgaccgggg gaaacgaggg tgacgctgca caggagaagg caccttccaa ttcgtccagc 301 aataacaacg acaacaacgg accgcctccc ggtgatgtgt tctgagttgg ccgcggagaa 361 acacggtgct tgcgcgaagt gcccggaccc ggatgaaaaa aaaccaaaca catcttcgtc 421 ccttcatctg tccccaccac ttctcaaatt gggtaacatg tacagcaacc aaaactatcc 481 cggatattca aaatcacccc tagttagatg gatttagtta cgcactttcc gtccacccca 541 aatccaagaa attgattcta tttatttttt gttctcctgt ccagtctaca catttcctga 601 atactaaa //