LOCUS CO897609 485 bp mRNA linear EST 12-JAN-2011 DEFINITION pe03h05.y1 Radopholus similis SL1 TOPO v1 Radopholus similis cDNA 5' similar to TR:O01542 O01542 CODED FOR BY C. ELEGANS CDNA YK66C9.5. [1], mRNA sequence. ACCESSION CO897609 VERSION CO897609.1 GI:51237399 KEYWORDS EST. SOURCE Radopholus similis ORGANISM Radopholus similis Eukaryota; Metazoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus. REFERENCE 1 (bases 1 to 485) AUTHORS McCarter,J., Clifton,S., Chiapelli,B., Pape,D., Martin,J., Wylie,T., Dante,M., Marra,M., Hillier,L., Kucaba,T., Theising,B., Bowers,Y., Gibbons,M., Ritter,E., Bennett,J., Franklin,C., Tsagareishvili,R., Ronko,I., Kennedy,S., Maguire,L., Beck,C., Underwood,K., Steptoe,M., Allen,M., Person,B., Swaller,T., Harvey,N., Schurk,R., Kohn,S., Shin,T., Jackson,Y., Cardenas,M., McCann,R., Waterston,R. and Wilson,R. TITLE The Washington Univ. Nematode EST Project, 1999 JOURNAL Unpublished COMMENT Contact: Mitreva M WashU Nematode EST Project Washington University School of Medicine 4444 Forest Park Parkway, Box 8501, St. Louis, MO 63108, USA Tel: 314 286 1800 Fax: 314 286 1810 Email: submissions@watson.wustl.edu Library constructed by: Irina Ronko and Dr. Makedonka Mitreva Seq primer: SL1 primer. FEATURES Location/Qualifiers source 1..485 /organism="Radopholus similis" /mol_type="mRNA" /db_xref="taxon:46012" /clone_lib="LIBEST_016211 Radopholus similis SL1 TOPO v1" /dev_stage="Mixed" /lab_host="GC10" /note="Vector: pCRII-TOPO (Invitrogen); Site_1: 5': EcoRI; Site_2: 3': EcoRI; The library was constructed by Irina Ronko and Dr. Makedonka Mitreva (mmitreva@watson.wustl.edu) at Washington University, St. Louis. Oligo(dT)-SL1 PCR based library. Radopholus similis cDNA PCR products of size >400 nucleotides containing SL1 on the 5' end and oligo(dT) on the 3' end were non-directionally cloned into pCRII-TOPO(Invitrogen) following the Topo TA cloning protocol. Radopholus similis total RNA was provided by Dr. Godelieve Gheysen of Ghent University (lighe@gengenp.rug.ac.be)." ORIGIN 1 gcgtctcgca ctactgccgg aggtattggt ttccaggttg tggccaagca ggcgagcaaa 61 tacagcaacc aggagggaga gatgtgcctg gcctggatca agaaaatgag cggcgagaat 121 atcagcacca acggcgaccg tgagaacttc tacaaattgc taaaagacgg cacactactg 181 tgcaagctgg ccaacgggat tcaggcgggc tccgtcaaga agatccagca gccgactggc 241 aacttcgcct gcatggagaa catcaacgct ttcgtgtcgt tcgcgaagag ccagggagtg 301 cccaccgagg agaccttcca gagcgtggac ttgttcgagg cacgtgacct ctactccgtg 361 tgcatgaccc tgttgtcgtt gggccgaatt atggagaaaa agggaaagcc gaacccattc 421 tctggatgaa gagtagaagt gagtgcagca aaagacggac agagcatgtg ctatcgctcc 481 cattc //